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    LOC108892800 isoaspartyl peptidase/L-asparaginase [ Lates calcarifer (barramundi perch) ]

    Gene ID: 108892800, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC108892800
    Gene description
    isoaspartyl peptidase/L-asparaginase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Lates calcarifer
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangaria incertae sedis; Centropomidae; Lates
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    Genomic context

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    See LOC108892800 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_02 current TLL_Latcal_v3 (GCF_001640805.2) Unplaced Scaffold NW_026116240.1 (198..1422, complement)
    100 previous assembly ASM164080v1 (GCF_001640805.1) Unplaced Scaffold NW_017365167.1 (233..1625, complement)

    NW_026116240.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Primary analysis of repeat elements of the Asian seabass (Lates calcarifer) transcriptome and genome. Kuznetsova IS, et al. Front Genet, 2014. PMID 25120555, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables asparaginase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    isoaspartyl peptidase/L-asparaginase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_001640805.2-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference TLL_Latcal_v3 Primary Assembly

    Genomic

    1. NW_026116240.1 Reference TLL_Latcal_v3 Primary Assembly

      Range
      198..1422 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018690525.2 → XP_018546041.2  isoaspartyl peptidase/L-asparaginase

      UniProtKB/TrEMBL
      A0AAJ7Q3U1
    Nucleotide Protein
    Heading Accession and Version

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