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    Rcd5 microspherule protein Rcd5 [ Drosophila navojoa ]

    Gene ID: 108652147, updated on 23-May-2024

    Summary

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    Gene symbol
    Rcd5
    Gene description
    microspherule protein Rcd5
    Locus tag
    AWZ03_005030
    See related
    EnsemblRapid:LOC108652147
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila navojoa
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Orthologs
    fruit fly all
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    Genomic context

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    See Rcd5 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current UFRJ_Dnav_4.2 (GCF_001654015.2) Unplaced Scaffold NW_022045891.1 (87938..89998, complement)
    100 previous assembly ASM165401v1 (GCF_001654015.1) 4 Unlocalized Scaffold NW_017181430.1 (18912099..18914157)

    NW_022045891.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108651406 Neighboring gene UDP-glucuronosyltransferase 2B15-like Neighboring gene uncharacterized LOC108652150 Neighboring gene protein dpy-30 homolog Neighboring gene protein prune homolog 2 Neighboring gene gustatory receptor for sugar taste 64e Neighboring gene Gustatory receptor 64f

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G-quadruplex RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Ino80 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of MLL1 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of NSL complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    microspherule protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila navojoa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UFRJ_Dnav_4.2

    Genomic

    1. NW_022045891.1 Reference UFRJ_Dnav_4.2

      Range
      87938..89998 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018102241.2 → XP_017957730.1  microspherule protein 1

      UniProtKB/TrEMBL
      A0A484BI09
      Related
      XP_017957730.1, XM_018102241.2
      Conserved Domains (2) summary
      cd00060
      Location:472 → 561
      FHA; Forkhead associated domain (FHA); found in eukaryotic and prokaryotic proteins. Putative nuclear signalling domain. FHA domains may bind phosphothreonine, phosphoserine and sometimes phosphotyrosine. In eukaryotes, many FHA domain-containing proteins ...
      pfam13325
      Location:249 → 446
      MCRS_N; N-terminal region of micro-spherule protein
    Nucleotide Protein
    Heading Accession and Version

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