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    gphnb gephyrin b [ Kryptolebias marmoratus (mangrove rivulus) ]

    Gene ID: 108233472, updated on 10-Apr-2024

    Summary

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    Gene symbol
    gphnb
    Gene description
    gephyrin b
    See related
    EnsemblRapid:ENSKMAG00010022244
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Kryptolebias marmoratus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Rivulidae; Kryptolebias
    Also known as
    gphn
    Orthologs
    zebrafish all
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    Genomic context

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    See gphnb in Genome Data Viewer
    Location:
    chromosome: LG19
    Exon count:
    26
    Annotation release Status Assembly LG Location
    102 current ASM164957v2 (GCF_001649575.2) LG19 NC_051448.1 (6691785..6852885)
    101 previous assembly ASM164957v1 (GCF_001649575.1) Unplaced Scaffold NW_016094260.1 (1927865..2088922, complement)

    Linkage Group LG19 - NC_051448.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 24 member 4b Neighboring gene transmembrane protein 121Ab Neighboring gene fucosyltransferase 8b (alpha (1,6) fucosyltransferase) Neighboring gene protein associated with LIN7 1, MAGUK p55 family member b Neighboring gene ATPase H+ transporting V1 subunit D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables molybdopterin molybdotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Mo-molybdopterin cofactor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of synaptic specificity at neuromuscular junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in gamma-aminobutyric acid receptor clustering IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycine receptor clustering IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in molybdenum incorporation into molybdenum-molybdopterin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in postsynaptic neurotransmitter receptor diffusion trapping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic specialization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gephyrin b
    Names
    gephyrin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Kryptolebias marmoratus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM164957v2 Primary Assembly

    Genomic

    1. NC_051448.1 Reference ASM164957v2 Primary Assembly

      Range
      6691785..6852885
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025005027.2 → XP_024860795.1  gephyrin b isoform X8

      UniProtKB/TrEMBL
      A0A3Q3BA03
      Conserved Domains (2) summary
      cd00886
      Location:11 → 158
      MogA_MoaB; MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, ...
      cd00887
      Location:374 → 781
      MoeA; MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and ...

    2. XM_025005028.2 → XP_024860796.1  gephyrin b isoform X8

      UniProtKB/TrEMBL
      A0A3Q3BA03
      Related
      ENSKMAP00010048011.1, ENSKMAT00010051047.1
      Conserved Domains (2) summary
      cd00886
      Location:11 → 158
      MogA_MoaB; MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, ...
      cd00887
      Location:374 → 781
      MoeA; MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and ...

    3. XM_017411976.3 → XP_017267465.1  gephyrin b isoform X1

      UniProtKB/TrEMBL
      A0A3Q3BA03

    4. XM_017411979.3 → XP_017267468.1  gephyrin b isoform X3

      UniProtKB/TrEMBL
      A0A3Q3BA03
      Related
      ENSKMAP00010047991.1, ENSKMAT00010051027.1

    5. XM_017411980.3 → XP_017267469.1  gephyrin b isoform X4

      UniProtKB/TrEMBL
      A0A3Q3BLB9
      Related
      ENSKMAP00010047969.1, ENSKMAT00010051005.1

    6. XM_025005024.2 → XP_024860792.1  gephyrin b isoform X5

      UniProtKB/TrEMBL
      A0A3Q3BLB9
      Conserved Domains (2) summary
      cd00886
      Location:77 → 231
      MogA_MoaB; MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, ...
      cd00887
      Location:414 → 821
      MoeA; MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and ...

    7. XM_017411977.3 → XP_017267466.1  gephyrin b isoform X2

      UniProtKB/TrEMBL
      A0A3Q3B8B5, A0A3Q3BA03
      Related
      ENSKMAP00010047982.1, ENSKMAT00010051018.1

    8. XM_025005025.2 → XP_024860793.1  gephyrin b isoform X6

      UniProtKB/TrEMBL
      A0A3Q3B9A6
      Related
      ENSKMAP00010047974.1, ENSKMAT00010051010.1
      Conserved Domains (2) summary
      cd00886
      Location:77 → 231
      MogA_MoaB; MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, ...
      cd00887
      Location:389 → 796
      MoeA; MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and ...

    9. XM_025005026.2 → XP_024860794.1  gephyrin b isoform X7

      UniProtKB/TrEMBL
      A0A3Q3B9A6, A0A3Q3BAC2
      Related
      ENSKMAP00010048003.1, ENSKMAT00010051039.1
      Conserved Domains (2) summary
      cd00886
      Location:77 → 231
      MogA_MoaB; MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, ...
      cd00887
      Location:389 → 795
      MoeA; MoeA family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF), an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea and ...
    Nucleotide Protein
    Heading Accession and Version

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