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    LOC107912189 NAC domain-containing protein 45-like [ Gossypium hirsutum (cotton) ]

    Gene ID: 107912189, updated on 12-Aug-2024

    Summary

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    Gene symbol
    LOC107912189
    Gene description
    NAC domain-containing protein 45-like
    Locus tag
    ERO13_D11G028700v2
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gossypium hirsutum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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    Genomic context

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    See LOC107912189 in Genome Data Viewer
    Location:
    chromosome: D11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current Gossypium_hirsutum_v2.1 (GCF_007990345.1) D11 NC_053447.1 (2398218..2403775)

    Chromosome D11 - NC_053447.1Genomic Context describing neighboring genes Neighboring gene glycine cleavage system H protein, mitochondrial Neighboring gene pentatricopeptide repeat-containing protein At5g46580, chloroplastic Neighboring gene AP-2 complex subunit mu Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized LOC121223612

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_053447.1 Chromosome D11 Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NAC domain-containing protein 45-like
    Names
    NAC domain protein NAC38

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001327063.1 → NP_001313992.1  NAC domain-containing protein 45-like

      Status: PROVISIONAL

      Source sequence(s)
      KC847215
      UniProtKB/TrEMBL
      W6JAP1
      Conserved Domains (1) summary
      pfam02365
      Location:8 → 133
      NAM; No apical meristem (NAM) protein

    RefSeqs of Annotated Genomes: GCF_007990345.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Gossypium_hirsutum_v2.1 Primary Assembly

    Genomic

    1. NC_053447.1 Reference Gossypium_hirsutum_v2.1 Primary Assembly

      Range
      2398218..2403775
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016840262.2 → XP_016695751.1  NAC domain-containing protein 45-like isoform X1

      UniProtKB/TrEMBL
      A0A1U8JZP7
      Conserved Domains (1) summary
      pfam02365
      Location:7 → 133
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases