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    LOC107872865 inactive poly [ADP-ribose] polymerase RCD1 [ Capsicum annuum ]

    Gene ID: 107872865, updated on 18-Sep-2024

    Summary

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    Gene symbol
    LOC107872865
    Gene description
    inactive poly [ADP-ribose] polymerase RCD1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Capsicum annuum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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    Genomic context

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    See LOC107872865 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    101 current UCD10Xv1.1 (GCF_002878395.1) 6 NC_061116.1 (187110900..187118049, complement)
    100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 6 NC_029982.1 (35451983..35458992)

    Chromosome 6 - NC_061116.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124899756 Neighboring gene probable transcription factor KAN2 Neighboring gene protein IWS1 homolog 1 Neighboring gene phosphomevalonate kinase, peroxisomal

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables NAD+-protein poly-ADP-ribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inactive poly [ADP-ribose] polymerase RCD1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCD10Xv1.1 Primary Assembly

    Genomic

    1. NC_061116.1 Reference UCD10Xv1.1 Primary Assembly

      Range
      187110900..187118049 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_047415000.1 → XP_047270956.1  inactive poly [ADP-ribose] polymerase RCD1 isoform X1

    2. XM_047415002.1 → XP_047270958.1  inactive poly [ADP-ribose] polymerase RCD1 isoform X2

    3. XM_016719513.2 → XP_016574999.2  inactive poly [ADP-ribose] polymerase RCD1 isoform X1

    4. XM_016719511.2 → XP_016574997.2  inactive poly [ADP-ribose] polymerase RCD1 isoform X1

    5. XM_047415001.1 → XP_047270957.1  inactive poly [ADP-ribose] polymerase RCD1 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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