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    LOC107851434 delta(12)-acyl-lipid-desaturase [ Capsicum annuum ]

    Gene ID: 107851434, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC107851434
    Gene description
    delta(12)-acyl-lipid-desaturase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Capsicum annuum
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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    Genomic context

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    See LOC107851434 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current UCD10Xv1.1 (GCF_002878395.1) 12 NC_061122.1 (232666763..232668289, complement)
    100 previous assembly Pepper Zunla 1 Ref_v1.0 (GCF_000710875.1) 12 NC_029988.1 (459944..461470)

    Chromosome 12 - NC_061122.1Genomic Context describing neighboring genes Neighboring gene 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like Neighboring gene delta(12)-fatty-acid desaturase FAD2 Neighboring gene delta(12)-fatty-acid desaturase FAD2 Neighboring gene delta(12)-fatty-acid desaturase FAD2 Neighboring gene delta(12)-acyl-lipid-desaturase-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    delta(12)-acyl-lipid-desaturase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Capsicum annuum Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCD10Xv1.1 Primary Assembly

    Genomic

    1. NC_061122.1 Reference UCD10Xv1.1 Primary Assembly

      Range
      232666763..232668289 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016696442.2 → XP_016551928.1  delta(12)-acyl-lipid-desaturase

      UniProtKB/TrEMBL
      A0A1U8EXK5
      Conserved Domains (1) summary
      PLN02505
      Location:1 → 382
      PLN02505; omega-6 fatty acid desaturase
    Nucleotide Protein
    Heading Accession and Version

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