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    LOC107393225 torsin-1A-interacting protein 2 [ Nothobranchius furzeri (turquoise killifish) ]

    Gene ID: 107393225, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC107393225
    Gene description
    torsin-1A-interacting protein 2
    See related
    Ensembl:ENSNFUG00015025087
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nothobranchius furzeri
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Nothobranchiidae; Nothobranchius
    Also known as
    TOR1AIP2
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    Genomic context

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    See LOC107393225 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_03 current UI_Nfuz_MZM_1.0 (GCF_027789165.1) Unplaced Scaffold NW_026539929.1 (24537077..24542477, complement)
    100 previous assembly Nfu_20140520 (GCF_001465895.1) sgr17 NC_029665.1 (27510715..27516115, complement)

    NW_026539929.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 6 Neighboring gene olfactomedin-like 2Ba Neighboring gene torsin-1A-interacting protein 1 Neighboring gene uncharacterized LOC107393227

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The transcript catalogue of the short-lived fish Nothobranchius furzeri provides insights into age-dependent changes of mRNA levels. Petzold A, et al. BMC Genomics, 2013 Mar 16. PMID 23496936, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in membrane organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    torsin-1A-interacting protein 2
    Names
    torsin A interacting protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027789165.1-RS_2023_03

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UI_Nfuz_MZM_1.0 Primary Assembly

    Genomic

    1. NW_026539929.1 Reference UI_Nfuz_MZM_1.0 Primary Assembly

      Range
      24537077..24542477 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015971448.2 → XP_015826934.2  torsin-1A-interacting protein 2

    2. XM_054730093.1 → XP_054586068.1  torsin-1A-interacting protein 2

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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