U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC107332755 uncharacterized LOC107332755 [ Acropora digitifera ]

    Gene ID: 107332755, updated on 2-Nov-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC107332755
    Gene description
    uncharacterized LOC107332755
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acropora digitifera
    Lineage
    Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC107332755 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Adig_1.1 (GCF_000222465.1) Unplaced Scaffold NW_015441098.1 (352773..360445)

    NW_015441098.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107332752 Neighboring gene keratin-associated protein 5-8-like Neighboring gene uncharacterized LOC107332757 Neighboring gene hippocalcin-like protein 1 pseudogene Neighboring gene ER membrane protein complex subunit 7-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_015441098.1 Unplaced Scaffold Reference Adig_1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in animal organ development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of MAP kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of Ras protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of fibroblast growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein LOC107332755

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Acropora digitifera Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Adig_1.1 Primary Assembly

    Genomic

    1. NW_015441098.1 Reference Adig_1.1 Primary Assembly

      Range
      352773..360445
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015897505.1 → XP_015752991.1  uncharacterized protein LOC107332755

      Conserved Domains (1) summary
      pfam05210
      Location:211 → 284
      Sprouty; Sprouty protein (Spry)

    2. XM_015897506.1 → XP_015752992.1  uncharacterized protein LOC107332755

      Conserved Domains (1) summary
      pfam05210
      Location:211 → 284
      Sprouty; Sprouty protein (Spry)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases