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    PCNA proliferating cell nuclear antigen [ Coturnix japonica (Japanese quail) ]

    Gene ID: 107323623, updated on 14-Mar-2024

    Summary

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    Gene symbol
    PCNA
    Gene description
    proliferating cell nuclear antigen
    See related
    Ensembl:ENSCJPG00005011978
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Coturnix japonica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Perdicinae; Coturnix
    Orthologs
    human mouse all
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    Genomic context

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    See PCNA in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current Coturnix japonica 2.1 (GCF_001577835.2) 22 NC_029537.1 (1569638..1572896)

    Chromosome 22 - NC_029537.1Genomic Context describing neighboring genes Neighboring gene Rho GTPase activating protein 25 Neighboring gene CDP-diacylglycerol synthase 2 Neighboring gene transmembrane protein 230 Neighboring gene solute carrier family 23 member 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029537.1 Chromosome 22 Reference Coturnix japonica 2.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. BMPs induce dermal markers and ectopic feather tracts. Scaal M, et al. Mech Dev, 2002 Jan. PMID 11744368
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA polymerase processivity factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in leading strand elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mismatch repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA replication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in translesion synthesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PCNA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proliferating cell nuclear antigen
    Names
    putative proliferating cell nuclear antigen

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001323225.1 → NP_001310154.1  proliferating cell nuclear antigen

      Status: PROVISIONAL

      Source sequence(s)
      AJ301669
      UniProtKB/Swiss-Prot
      Q9DDF1
      UniProtKB/TrEMBL
      A0A8C2TNH0
      Related
      ENSCJPP00005014338.1, ENSCJPT00005020430.1
      Conserved Domains (2) summary
      cd00577
      Location:4 → 256
      PCNA; Proliferating Cell Nuclear Antigen (PCNA) domain found in eukaryotes and archaea. These polymerase processivity factors play a role in DNA replication and repair. PCNA encircles duplex DNA in its central cavity, providing a DNA-bound platform for the ...
      TIGR00590
      Location:1 → 259
      pcna; proliferating cell nuclear antigen (pcna)

    RefSeqs of Annotated Genomes: Coturnix japonica Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Coturnix japonica 2.1 Primary Assembly

    Genomic

    1. NC_029537.1 Reference Coturnix japonica 2.1 Primary Assembly

      Range
      1569638..1572896
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9DDF1.1 GenPept UniProtKB/Swiss-Prot:Q9DDF1

    Gene LinkOut

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