U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    GALE UDP-galactose-4-epimerase [ Parus major (Great Tit) ]

    Gene ID: 107214262, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    GALE
    Gene description
    UDP-galactose-4-epimerase
    See related
    Ensembl:ENSPMJG00000000656
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parus major
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See GALE in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    102 current Parus_major1.1 (GCF_001522545.3) 23 NC_031791.1 (1358000..1361471)
    100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 23 NC_029291.1 (1357999..1361470)

    Chromosome 23 - NC_031791.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107214206 Neighboring gene alpha-L-fucosidase 1 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA lyase Neighboring gene lysophospholipase 2 Neighboring gene PITH domain containing 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-glucose 4-epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in galactose catabolic process via UDP-galactose IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    UDP-glucose 4-epimerase

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Parus_major1.1 Primary Assembly

    Genomic

    1. NC_031791.1 Reference Parus_major1.1 Primary Assembly

      Range
      1358000..1361471
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015649487.2 → XP_015504973.1  UDP-glucose 4-epimerase isoform X2

      Related
      ENSPMJP00000000791.1, ENSPMJT00000001050.1
      Conserved Domains (2) summary
      cd05247
      Location:5 → 337
      UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs
      TIGR01179
      Location:5 → 340
      galE; UDP-glucose-4-epimerase GalE

    2. XM_015649484.3 → XP_015504970.1  UDP-glucose 4-epimerase isoform X1

      Related
      ENSPMJP00000000809.1, ENSPMJT00000001073.1
      Conserved Domains (2) summary
      cd05247
      Location:15 → 347
      UDP_G4E_1_SDR_e; UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs
      TIGR01179
      Location:15 → 350
      galE; UDP-glucose-4-epimerase GalE
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.