U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CHST8 carbohydrate sulfotransferase 8 [ Parus major (Great Tit) ]

    Gene ID: 107210005, updated on 3-Aug-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    CHST8
    Gene description
    carbohydrate sulfotransferase 8
    See related
    Ensembl:ENSPMJG00000003649
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parus major
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CHST8 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    102 current Parus_major1.1 (GCF_001522545.3) 11 NC_031780.1 (17954161..18130870)
    100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 11 NC_029280.1 (17954161..18131387)

    Chromosome 11 - NC_031780.1Genomic Context describing neighboring genes Neighboring gene CCAAT enhancer binding protein gamma Neighboring gene peptidase D Neighboring gene uncharacterized LOC107210006 Neighboring gene transcription initiation factor TFIID subunit 4-like Neighboring gene potassium channel tetramerization domain containing 15

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sulfotransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteoglycan biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    carbohydrate sulfotransferase 8

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Parus_major1.1 Primary Assembly

    Genomic

    1. NC_031780.1 Reference Parus_major1.1 Primary Assembly

      Range
      17954161..18130870
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015640303.2 → XP_015495789.1  carbohydrate sulfotransferase 8 isoform X1

      Related
      ENSPMJP00000004220.1, ENSPMJT00000005934.1
      Conserved Domains (1) summary
      pfam03567
      Location:195 → 424
      Sulfotransfer_2; Sulfotransferase family

    2. XM_015640307.2 → XP_015495793.1  carbohydrate sulfotransferase 8 isoform X2

      Conserved Domains (1) summary
      pfam03567
      Location:194 → 423
      Sulfotransfer_2; Sulfotransferase family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.