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    CC2D2A coiled-coil and C2 domain containing 2A [ Parus major (Great Tit) ]

    Gene ID: 107202987, updated on 3-Aug-2024

    Summary

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    Gene symbol
    CC2D2A
    Gene description
    coiled-coil and C2 domain containing 2A
    See related
    Ensembl:ENSPMJG00000016364
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Parus major
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Paridae; Parus
    Orthologs
    human mouse all
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    Genomic context

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    See CC2D2A in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    102 current Parus_major1.1 (GCF_001522545.3) 4 NC_031771.1 (54203870..54253118, complement)
    100 previous assembly Parus_major1.0.3 (GCF_001522545.1) 4 NC_029271.1 (54201680..54253128, complement)

    Chromosome 4 - NC_031771.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2-like Neighboring gene F-box and leucine rich repeat protein 5 Neighboring gene uncharacterized LOC117244238 Neighboring gene C1q and TNF related 7 Neighboring gene cytoplasmic polyadenylation element binding protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in non-motile cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to ciliary transition zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary transition zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil and C2 domain-containing protein 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Parus major Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Parus_major1.1 Primary Assembly

    Genomic

    1. NC_031771.1 Reference Parus_major1.1 Primary Assembly

      Range
      54203870..54253118 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015624149.3 → XP_015479635.1  coiled-coil and C2 domain-containing protein 2A isoform X1

      Related
      ENSPMJP00000022054.1, ENSPMJT00000028709.1
      Conserved Domains (2) summary
      pfam15625
      Location:534 → 705
      CC2D2AN-C2; CC2D2A N-terminal C2 domain
      cl14603
      Location:984 → 1024
      C2; C2 domain

    2. XM_015624150.3 → XP_015479636.1  coiled-coil and C2 domain-containing protein 2A isoform X2

      Conserved Domains (2) summary
      pfam15625
      Location:492 → 663
      CC2D2AN-C2; CC2D2A N-terminal C2 domain
      cl14603
      Location:942 → 982
      C2; C2 domain
    Nucleotide Protein
    Heading Accession and Version

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