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    LOC107031147 pyruvate kinase isozyme A, chloroplastic [ Solanum pennellii ]

    Gene ID: 107031147, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC107031147
    Gene description
    pyruvate kinase isozyme A, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum pennellii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
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    Genomic context

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    See LOC107031147 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current SPENNV200 (GCF_001406875.1) 9 NC_028645.1 (80191488..80201180)

    Chromosome 9 - NC_028645.1Genomic Context describing neighboring genes Neighboring gene guanine nucleotide-binding protein subunit gamma 1 Neighboring gene protein SRC2 homolog Neighboring gene uncharacterized LOC107031432 Neighboring gene GDP-mannose 3,5-epimerase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_028645.1 Chromosome 9 Reference SPENNV200

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables magnesium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables potassium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyruvate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycolytic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast stroma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyruvate kinase isozyme A, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum pennellii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SPENNV200

    Genomic

    1. NC_028645.1 Reference SPENNV200

      Range
      80191488..80201180
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027919435.1 → XP_027775236.1  pyruvate kinase isozyme A, chloroplastic isoform X2

    2. XM_015232389.2 → XP_015087875.1  pyruvate kinase isozyme A, chloroplastic isoform X1

      Conserved Domains (2) summary
      PLN02762
      Location:95 → 593
      PLN02762; pyruvate kinase complex alpha subunit
      cl23794
      Location:114 → 581
      Pyruvate_Kinase; Pyruvate kinase (PK): Large allosteric enzyme that regulates glycolysis through binding of the substrate, phosphoenolpyruvate, and one or more allosteric effectors. Like other allosteric enzymes, PK has a high substrate affinity R state and a low ...
    Nucleotide Protein
    Heading Accession and Version

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