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    LOC107014933 aquaporin TIP2-1 [ Solanum pennellii ]

    Gene ID: 107014933, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC107014933
    Gene description
    aquaporin TIP2-1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum pennellii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
    Also known as
    CT179
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    Genomic context

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    See LOC107014933 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    101 current SPENNV200 (GCF_001406875.1) 3 NC_028639.1 (73461640..73463182, complement)

    Chromosome 3 - NC_028639.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At1g62930, chloroplastic-like Neighboring gene tRNase Z TRZ3, mitochondrial Neighboring gene uncharacterized LOC107012112 Neighboring gene uncharacterized LOC107012110

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_028639.1 Chromosome 3 Reference SPENNV200

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables water channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in water transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    aquaporin TIP2-1
    Names
    putative delta-type tonoplast intrinsic protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum pennellii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SPENNV200

    Genomic

    1. NC_028639.1 Reference SPENNV200

      Range
      73461640..73463182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015215058.1 → XP_015070544.1  aquaporin TIP2-1

      Conserved Domains (1) summary
      cl00200
      Location:5 → 249
      MIP; Major intrinsic protein (MIP) superfamily. Members of the MIP superfamily function as membrane channels that selectively transport water, small neutral molecules, and ions out of and between cells. The channel proteins share a common fold: the N-terminal ...
    Nucleotide Protein
    Heading Accession and Version

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