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    LOC107002170 arginine decarboxylase [ Solanum pennellii ]

    Gene ID: 107002170, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC107002170
    Gene description
    arginine decarboxylase
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Solanum pennellii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum; Solanum subgen. Lycopersicon
    Also known as
    adc1
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    Genomic context

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    See LOC107002170 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current SPENNV200 (GCF_001406875.1) 10 NC_028646.1 (66334495..66337258, complement)

    Chromosome 10 - NC_028646.1Genomic Context describing neighboring genes Neighboring gene photosynthetic NDH subunit of lumenal location 1, chloroplastic Neighboring gene uncharacterized LOC107001822 Neighboring gene berberine bridge enzyme-like 22 Neighboring gene berberine bridge enzyme-like 22

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_028646.1 Chromosome 10 Reference SPENNV200

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables arginine decarboxylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in arginine catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in spermidine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arginine decarboxylase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Solanum pennellii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference SPENNV200

    Genomic

    1. NC_028646.1 Reference SPENNV200

      Range
      66334495..66337258 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015200083.2 → XP_015055569.1  arginine decarboxylase

      Conserved Domains (2) summary
      cd06830
      Location:105 → 598
      PLPDE_III_ADC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Arginine Decarboxylase
      PLN02439
      Location:110 → 670
      PLN02439; arginine decarboxylase
    Nucleotide Protein
    Heading Accession and Version

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