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    arl8 ADP-ribosylation factor-like 8 [ Poecilia latipinna (sailfin molly) ]

    Gene ID: 106961991, updated on 13-Mar-2024

    Summary

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    Gene symbol
    arl8
    Gene description
    ADP-ribosylation factor-like 8
    See related
    Ensembl:ENSPLAG00000021807
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Poecilia latipinna
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
    Orthologs
    zebrafish all
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    Genomic context

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    See arl8 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current P_latipinna-1.0 (GCF_001443285.1) Unplaced Scaffold NW_015112675.1 (283895..291265, complement)

    NW_015112675.1Genomic Context describing neighboring genes Neighboring gene zinc finger, AN1-type domain 1 Neighboring gene MAF1 homolog, negative regulator of RNA polymerase III b Neighboring gene NOP2/Sun RNA methyltransferase 6 Neighboring gene calcium channel, voltage-dependent, beta 2a

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_015112675.1 Unplaced Scaffold Reference P_latipinna-1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in trans-Golgi network IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ADP-ribosylation factor-like protein 5B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Poecilia latipinna Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P_latipinna-1.0

    Genomic

    1. NW_015112675.1 Reference P_latipinna-1.0

      Range
      283895..291265 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015056133.1 → XP_014911619.1  ADP-ribosylation factor-like protein 5B

      UniProtKB/TrEMBL
      A0A3B3UXL1
      Related
      ENSPLAP00000017427.1, ENSPLAT00000026646.1
      Conserved Domains (1) summary
      cd04153
      Location:3 → 175
      Arl5_Arl8; Arf-like 5 (Arl5) and 8 (Arl8) GTPases
    Nucleotide Protein
    Heading Accession and Version

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