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    LOC106765071 heterogeneous nuclear ribonucleoprotein 1 [ Vigna radiata ]

    Gene ID: 106765071, updated on 11-Jan-2024

    Summary

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    Gene symbol
    LOC106765071
    Gene description
    heterogeneous nuclear ribonucleoprotein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vigna radiata
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna
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    Genomic context

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    See LOC106765071 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current Vradiata_ver6 (GCF_000741045.1) 6 NC_028356.1 (425088..430386, complement)

    Chromosome 6 - NC_028356.1Genomic Context describing neighboring genes Neighboring gene putative MO25-like protein At5g47540 Neighboring gene cytochrome b561 and DOMON domain-containing protein At2g04850 Neighboring gene BTB/POZ domain-containing protein At5g48130 Neighboring gene probable serine/threonine-protein kinase WNK11 Neighboring gene protein DGCR14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_028356.1 Chromosome 6 Reference Vradiata_ver6 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    heterogeneous nuclear ribonucleoprotein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Vigna radiata Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Vradiata_ver6 Primary Assembly

    Genomic

    1. NC_028356.1 Reference Vradiata_ver6 Primary Assembly

      Range
      425088..430386 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014649565.2 → XP_014505051.1  heterogeneous nuclear ribonucleoprotein 1

      UniProtKB/TrEMBL
      A0A1S3UGA6
      Conserved Domains (3) summary
      COG0724
      Location:3 → 169
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12325
      Location:8 → 78
      RRM1_hnRNPA_hnRNPD_like; RNA recognition motif 1 in heterogeneous nuclear ribonucleoprotein hnRNP A and hnRNP D subfamilies and similar proteins
      cd12327
      Location:104 → 183
      RRM2_DAZAP1; RNA recognition motif 2 in Deleted in azoospermia-associated protein 1 (DAZAP1) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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