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    LOC106322699 protein ALWAYS EARLY 1-like [ Brassica oleracea (wild cabbage) ]

    Gene ID: 106322699, updated on 30-Oct-2024

    Summary

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    Gene symbol
    LOC106322699
    Gene description
    protein ALWAYS EARLY 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica oleracea
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC106322699 in Genome Data Viewer
    Location:
    chromosome: C2
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    100 current BOL (GCF_000695525.1) C2 NC_027749.1 (48427964..48433475)

    Chromosome C2 - NC_027749.1Genomic Context describing neighboring genes Neighboring gene mitochondrial Rho GTPase 1-like Neighboring gene kinesin-like protein klp-3 Neighboring gene cyclin-H1-1 Neighboring gene acyl-CoA-binding domain-containing protein 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_027749.1 Chromosome C2 Reference BOL Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of transcription repressor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein ALWAYS EARLY 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica oleracea Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference BOL Primary Assembly

    Genomic

    1. NC_027749.1 Reference BOL Primary Assembly

      Range
      48427964..48433475
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013760802.1 → XP_013616256.1  protein ALWAYS EARLY 1-like

      UniProtKB/TrEMBL
      A0A0D3AX99
      Conserved Domains (1) summary
      pfam06584
      Location:549 → 648
      DIRP; DIRP
    Nucleotide Protein
    Heading Accession and Version

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