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    Sgcd sarcoglycan delta [ Dipodomys ordii (Ord's kangaroo rat) ]

    Gene ID: 105996737, updated on 13-Mar-2024

    Summary

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    Gene symbol
    Sgcd
    Gene description
    sarcoglycan delta
    See related
    Ensembl:ENSDORG00000000348
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Dipodomys ordii
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
    Orthologs
    human mouse all
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    Genomic context

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    See Sgcd in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267351.1 (529899..770721, complement)

    NW_012267351.1Genomic Context describing neighboring genes Neighboring gene hepatitis A virus cellular receptor 2 Neighboring gene hepatitis A virus cellular receptor 1 Neighboring gene T cell immunoglobulin and mucin domain containing 4 Neighboring gene very-long-chain 3-oxoacyl-CoA reductase pseudogene Neighboring gene platelet-activating factor acetylhydrolase IB subunit beta pseudogene

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012267351.1 Unplaced Scaffold Reference Dord_2.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cardiac muscle tissue development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in heart contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of sarcoglycan complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    delta-sarcoglycan

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Dord_2.0

    Genomic

    1. NW_012267351.1 Reference Dord_2.0

      Range
      529899..770721 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013030923.1 → XP_012886377.1  delta-sarcoglycan

      UniProtKB/TrEMBL
      A0A1S3GEF0
      Related
      ENSDORP00000000323.2, ENSDORT00000000345.2
      Conserved Domains (1) summary
      pfam04790
      Location:28 → 276
      Sarcoglycan_1; Sarcoglycan complex subunit protein
    Nucleotide Protein
    Heading Accession and Version

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