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    LOC105797960 zinc finger protein ZAT11 [ Gossypium raimondii (Peruvian cotton) ]

    Gene ID: 105797960, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC105797960
    Gene description
    zinc finger protein ZAT11
    Locus tag
    B456_006G176000
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gossypium raimondii
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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    Genomic context

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    See LOC105797960 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current ASM2569854v1 (GCF_025698545.1) 9 NC_068573.1 (42263130..42263887)
    100 previous assembly Graimondii2_0 (GCF_000327365.1) 6 NC_026934.1 (43400609..43401917)

    Chromosome 9 - NC_068573.1Genomic Context describing neighboring genes Neighboring gene WAT1-related protein At2g37460 Neighboring gene type I inositol polyphosphate 5-phosphatase 8 Neighboring gene zinc finger protein ZAT11 Neighboring gene uncharacterized LOC105799879

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to chitin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to stress IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger protein ZAT11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gossypium raimondii Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2569854v1 Primary Assembly

    Genomic

    1. NC_068573.1 Reference ASM2569854v1 Primary Assembly

      Range
      42263130..42263887
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012627823.2 → XP_012483277.1  zinc finger protein ZAT11

      See identical proteins and their annotated locations for XP_012483277.1

      UniProtKB/TrEMBL
      A0A0D2NU75
      Conserved Domains (1) summary
      pfam13912
      Location:38 → 64
      zf-C2H2_6; C2H2-type zinc finger
    Nucleotide Protein
    Heading Accession and Version

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