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    LOC105637581 ethylene-responsive transcription factor ERF003 [ Jatropha curcas ]

    Gene ID: 105637581, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC105637581
    Gene description
    ethylene-responsive transcription factor ERF003
    Locus tag
    JCGZ_07111
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Jatropha curcas
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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    Genomic context

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    See LOC105637581 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current RJC1_Hi-C (GCF_014843425.1) Unplaced Scaffold NW_023590956.1 (1852426..1853572, complement)
    101 previous assembly JatCur_1.0 (GCF_000696525.1) Unplaced Scaffold NW_012124394.1 (799702..800802, complement)

    NW_023590956.1Genomic Context describing neighboring genes Neighboring gene deSI-like protein At4g17486 Neighboring gene uncharacterized LOC105637579 Neighboring gene probable homogentisate phytyltransferase 1, chloroplastic Neighboring gene aspartate aminotransferase, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ethylene-responsive transcription factor ERF003

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Jatropha curcas Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference RJC1_Hi-C Primary Assembly

    Genomic

    1. NW_023590956.1 Reference RJC1_Hi-C Primary Assembly

      Range
      1852426..1853572 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012221073.3 → XP_012076463.1  ethylene-responsive transcription factor ERF003

      See identical proteins and their annotated locations for XP_012076463.1

      UniProtKB/TrEMBL
      A0A067KML9
      Conserved Domains (1) summary
      smart00380
      Location:7 → 69
      AP2; DNA-binding domain in plant proteins such as APETALA2 and EREBPs
    Nucleotide Protein
    Heading Accession and Version

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