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    LOC105619235 alkylated DNA repair protein alkB homolog 8 [ Atta cephalotes ]

    Gene ID: 105619235, updated on 1-Oct-2024

    Summary

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    Gene symbol
    LOC105619235
    Gene description
    alkylated DNA repair protein alkB homolog 8
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Atta cephalotes
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Atta
    Orthologs
    honey bee all
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    Genomic context

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    See LOC105619235 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current Attacep1.0 (GCF_000143395.1) Unplaced Scaffold NW_012130084.1 (553981..557095, complement)

    NW_012130084.1Genomic Context describing neighboring genes Neighboring gene scruin like at the midline Neighboring gene exosome complex component Rrp45 Neighboring gene small ubiquitin-related modifier-like Neighboring gene orion

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_012130084.1 Unplaced Scaffold Reference Attacep1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA wobble uridine modification IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alkylated DNA repair protein alkB homolog 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Atta cephalotes Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Attacep1.0

    Genomic

    1. NW_012130084.1 Reference Attacep1.0

      Range
      553981..557095 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012200758.1 → XP_012056148.1  alkylated DNA repair protein alkB homolog 8

      UniProtKB/TrEMBL
      A0A158NF40
      Conserved Domains (3) summary
      cd12431
      Location:43 → 121
      RRM_ALKBH8; RNA recognition motif in alkylated DNA repair protein alkB homolog 8 (ALKBH8) and similar proteins
      pfam08241
      Location:399 → 489
      Methyltransf_11; Methyltransferase domain
      cl21496
      Location:137 → 326
      2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily
    Nucleotide Protein
    Heading Accession and Version

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