U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ESR1 estrogen receptor 1 [ Colobus angolensis palliatus ]

    Gene ID: 105513022, updated on 19-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ESR1
    Gene description
    estrogen receptor 1
    See related
    Ensembl:ENSCANG00000041777
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Colobus angolensis palliatus (sub-species: palliatus)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Colobus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ESR1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current Cang.pa_1.0 (GCF_000951035.1) Unplaced Scaffold NW_012115389.1 (2757898..3173332, complement)

    NW_012115389.1Genomic Context describing neighboring genes Neighboring gene MYC target 1 Neighboring gene spectrin repeat containing nuclear envelope protein 1 Neighboring gene coiled-coil domain containing 170 Neighboring gene acidic residue methyltransferase 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_012115389.1 Unplaced Scaffold Reference Cang.pa_1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear estrogen receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables steroid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in steroid hormone receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    estrogen receptor

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Colobus angolensis palliatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cang.pa_1.0

    Genomic

    1. NW_012115389.1 Reference Cang.pa_1.0

      Range
      2757898..3173332 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011943764.1 → XP_011799154.1  estrogen receptor isoform X2

      See identical proteins and their annotated locations for XP_011799154.1

      UniProtKB/TrEMBL
      A0A2K5K518
      Conserved Domains (4) summary
      cd06949
      Location:310 → 547
      NR_LBD_ER; Ligand binding domain of Estrogen receptor, which are activated by the hormone 17beta-estradiol (estrogen)
      cd07171
      Location:180 → 261
      NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
      pfam02159
      Location:42 → 181
      Oest_recep; Oestrogen receptor
      pfam12743
      Location:556 → 595
      ESR1_C; Oestrogen-type nuclear receptor final C-terminal

    2. XM_011943767.1 → XP_011799157.1  estrogen receptor isoform X3

      Conserved Domains (4) summary
      cd06949
      Location:309 → 546
      NR_LBD_ER; Ligand binding domain of Estrogen receptor, which are activated by the hormone 17beta-estradiol (estrogen)
      cd07171
      Location:180 → 260
      NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
      pfam02159
      Location:42 → 181
      Oest_recep; Oestrogen receptor
      pfam12743
      Location:555 → 594
      ESR1_C; Oestrogen-type nuclear receptor final C-terminal

    3. XM_011943763.1 → XP_011799153.1  estrogen receptor isoform X2

      See identical proteins and their annotated locations for XP_011799153.1

      UniProtKB/TrEMBL
      A0A2K5K518
      Related
      ENSCANP00000036203.1, ENSCANT00000059452.1
      Conserved Domains (4) summary
      cd06949
      Location:310 → 547
      NR_LBD_ER; Ligand binding domain of Estrogen receptor, which are activated by the hormone 17beta-estradiol (estrogen)
      cd07171
      Location:180 → 261
      NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
      pfam02159
      Location:42 → 181
      Oest_recep; Oestrogen receptor
      pfam12743
      Location:556 → 595
      ESR1_C; Oestrogen-type nuclear receptor final C-terminal

    4. XM_011943761.1 → XP_011799151.1  estrogen receptor isoform X1

      Conserved Domains (4) summary
      cd06949
      Location:312 → 549
      NR_LBD_ER; Ligand binding domain of Estrogen receptor, which are activated by the hormone 17beta-estradiol (estrogen)
      cd07171
      Location:180 → 263
      NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
      pfam02159
      Location:42 → 181
      Oest_recep; Oestrogen receptor
      pfam12743
      Location:558 → 597
      ESR1_C; Oestrogen-type nuclear receptor final C-terminal

    5. XM_011943765.1 → XP_011799155.1  estrogen receptor isoform X2

      See identical proteins and their annotated locations for XP_011799155.1

      UniProtKB/TrEMBL
      A0A2K5K518
      Conserved Domains (4) summary
      cd06949
      Location:310 → 547
      NR_LBD_ER; Ligand binding domain of Estrogen receptor, which are activated by the hormone 17beta-estradiol (estrogen)
      cd07171
      Location:180 → 261
      NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
      pfam02159
      Location:42 → 181
      Oest_recep; Oestrogen receptor
      pfam12743
      Location:556 → 595
      ESR1_C; Oestrogen-type nuclear receptor final C-terminal

    6. XM_011943762.1 → XP_011799152.1  estrogen receptor isoform X2

      See identical proteins and their annotated locations for XP_011799152.1

      UniProtKB/TrEMBL
      A0A2K5K518
      Conserved Domains (4) summary
      cd06949
      Location:310 → 547
      NR_LBD_ER; Ligand binding domain of Estrogen receptor, which are activated by the hormone 17beta-estradiol (estrogen)
      cd07171
      Location:180 → 261
      NR_DBD_ER; DNA-binding domain of estrogen receptors (ER) is composed of two C4-type zinc fingers
      pfam02159
      Location:42 → 181
      Oest_recep; Oestrogen receptor
      pfam12743
      Location:556 → 595
      ESR1_C; Oestrogen-type nuclear receptor final C-terminal
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.