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    LOC105435264 sigma factor binding protein 2, chloroplastic [ Cucumis sativus (cucumber) ]

    Gene ID: 105435264, updated on 14-Dec-2023

    Summary

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    Gene symbol
    LOC105435264
    Gene description
    sigma factor binding protein 2, chloroplastic
    Locus tag
    Csa_012221
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis sativus
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current Cucumber_9930_V3 (GCF_000004075.3) 4 NC_026658.2 (19238006..19238867)
    101 previous assembly ASM407v2 (GCF_000004075.2) 4 NC_026658.1 (16320563..16321422)

    Chromosome 4 - NC_026658.2Genomic Context describing neighboring genes Neighboring gene microtubule-associated protein 70-1 Neighboring gene uncharacterized LOC101220293 Neighboring gene phosphatidylinositol 4-phosphate 5-kinase 5 Neighboring gene uncharacterized LOC116403553

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sigma factor binding protein 2, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis sativus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cucumber_9930_V3 Primary Assembly

    Genomic

    1. NC_026658.2 Reference Cucumber_9930_V3 Primary Assembly

      Range
      19238006..19238867
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011655556.2 → XP_011653858.1  sigma factor binding protein 2, chloroplastic

      See identical proteins and their annotated locations for XP_011653858.1

      UniProtKB/TrEMBL
      A0A0A0L3J8
      Conserved Domains (1) summary
      pfam05678
      Location:42 → 68
      VQ; VQ motif
    Nucleotide Protein
    Heading Accession and Version

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