U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC105280557 KICSTOR complex protein kaptin [ Ooceraea biroi (clonal raider ant) ]

    Gene ID: 105280557, updated on 1-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC105280557
    Gene description
    KICSTOR complex protein kaptin
    Locus tag
    DMN91_009947
    See related
    EnsemblRapid:LOC105280557
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ooceraea biroi
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Dorylinae; Ooceraea
    Orthologs
    honey bee all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC105280557 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current Obir_v5.4 (GCF_003672135.1) 10 NC_039515.1 (952515..954941, complement)

    Chromosome 10 - NC_039515.1Genomic Context describing neighboring genes Neighboring gene calmodulin Neighboring gene tetratricopeptide repeat domain 7 Neighboring gene annexin B9 Neighboring gene uncharacterized LOC105280556

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_039515.1 Chromosome 10 Reference Obir_v5.4

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The genome of the clonal raider ant Cerapachys biroi. Oxley PR, et al. Curr Biol, 2014 Feb 17. PMID 24508170, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to amino acid starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of TORC1 signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of KICSTOR complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lamellipodium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    KICSTOR complex protein kaptin
    Names
    kaptin

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Ooceraea biroi Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Obir_v5.4

    Genomic

    1. NC_039515.1 Reference Obir_v5.4

      Range
      952515..954941 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_020032059.2 → XP_019887618.1  KICSTOR complex protein kaptin

      UniProtKB/TrEMBL
      A0A026WE04
      Related
      XP_019887618.1, XM_020032059.2
      Conserved Domains (2) summary
      pfam13517
      Location:328 → 386
      VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
      cl11396
      Location:246 → 318
      Patatin_and_cPLA2; Patatins and Phospholipases

    2. XM_011341182.2 → XP_011339484.1  KICSTOR complex protein kaptin

      See identical proteins and their annotated locations for XP_011339484.1

      UniProtKB/TrEMBL
      A0A026WE04
      Related
      XP_011339484.1, XM_011341182.2
      Conserved Domains (2) summary
      pfam13517
      Location:328 → 386
      VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
      cl11396
      Location:246 → 318
      Patatin_and_cPLA2; Patatins and Phospholipases

    3. XM_011341181.3 → XP_011339483.1  KICSTOR complex protein kaptin

      See identical proteins and their annotated locations for XP_011339483.1

      UniProtKB/TrEMBL
      A0A026WE04
      Related
      XP_011339483.1, XM_011341181.3
      Conserved Domains (2) summary
      pfam13517
      Location:328 → 386
      VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
      cl11396
      Location:246 → 318
      Patatin_and_cPLA2; Patatins and Phospholipases
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases