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    ft cadherin-related tumor suppressor fat [ Fopius arisanus ]

    Gene ID: 105273363, updated on 22-May-2024

    Summary

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    Gene symbol
    ft
    Gene description
    cadherin-related tumor suppressor fat
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Fopius arisanus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Ichneumonoidea; Braconidae; Opiinae; Fopius
    Also known as
    ft_1
    Orthologs
    fruit fly all
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current ASM80636v1 (GCF_000806365.1) Unplaced Scaffold NW_011887744.1 (999952..1078885, complement)

    NW_011887744.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein KIAA1143 homolog Neighboring gene uncharacterized protein C1orf198 homolog Neighboring gene uncharacterized LOC105273367 Neighboring gene FCF1 rRNA-processing protein Bka

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011887744.1 Unplaced Scaffold Reference ASM80636v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell-cell junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cadherin-related tumor suppressor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Fopius arisanus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM80636v1

    Genomic

    1. NW_011887744.1 Reference ASM80636v1

      Range
      999952..1078885 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011315764.1 → XP_011314066.1  cadherin-related tumor suppressor

      UniProtKB/TrEMBL
      A0A9R1U9K6
      Conserved Domains (6) summary
      cd11304
      Location:3461 → 3558
      Cadherin_repeat; Cadherin tandem repeat domain
      cd00054
      Location:3994 → 4028
      EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
      cd00055
      Location:3900 → 3929
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      pfam00008
      Location:3918 → 3946
      EGF; EGF-like domain
      pfam02210
      Location:4330 → 4455
      Laminin_G_2; Laminin G domain
      cl22861
      Location:4056 → 4208
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    Nucleotide Protein
    Heading Accession and Version

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