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    LOC105257002 cysteine-rich PDZ-binding protein [ Camponotus floridanus (Florida carpenter ant) ]

    Gene ID: 105257002, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC105257002
    Gene description
    cysteine-rich PDZ-binding protein
    See related
    EnsemblRapid:LOC105257002
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camponotus floridanus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Formicinae; Camponotus
    Orthologs
    fruit fly honey bee all
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    Genomic context

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    See LOC105257002 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current Cflo_v7.5 (GCF_003227725.1) Unplaced Scaffold NW_020229370.1 (1617199..1618135, complement)
    101 previous assembly CamFlo_1.0 (GCF_000147175.1) Unplaced Scaffold NW_011885627.1 (595996..596934)

    NW_020229370.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105257003 Neighboring gene chaperonin containing TCP1 subunit 4 Neighboring gene lysine-specific demethylase 6A-like Neighboring gene uncharacterized LOC105257000

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables PDZ domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic microtubule organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in dendrite IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cysteine-rich PDZ-binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camponotus floridanus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cflo_v7.5

    Genomic

    1. NW_020229370.1 Reference Cflo_v7.5

      Range
      1617199..1618135 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011267337.3 → XP_011265639.1  cysteine-rich PDZ-binding protein

      See identical proteins and their annotated locations for XP_011265639.1

      Related
      XP_011265639.1, XM_011267337.3
      Conserved Domains (1) summary
      pfam10235
      Location:11 → 98
      Cript; Microtubule-associated protein CRIPT
    Nucleotide Protein Strain
    Heading Accession and Version

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