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    LOC105154541 zinc carboxypeptidase A 1-like [ Acromyrmex echinatior (Panamanian leafcutter ant) ]

    Gene ID: 105154541, updated on 22-Oct-2023

    Summary

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    Gene symbol
    LOC105154541
    Gene description
    zinc carboxypeptidase A 1-like
    Locus tag
    G5I_00021
    See related
    EnsemblRapid:LOC105154541
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acromyrmex echinatior
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Formicoidea; Formicidae; Myrmicinae; Acromyrmex
    Annotation information
    Annotation category: partial on reference assembly
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    Genomic context

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    See LOC105154541 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current Aech_3.9 (GCF_000204515.1) Unplaced Scaffold NW_011626208.1 (121..1170, complement)

    NW_011626208.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011626208.1 Unplaced Scaffold Reference Aech_3.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metallocarboxypeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc carboxypeptidase A 1-like
    Names
    Zinc carboxypeptidase A 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Acromyrmex echinatior Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Aech_3.9

    Genomic

    1. NW_011626208.1 Reference Aech_3.9

      Range
      121..1170 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011070177.1 → XP_011068479.1  zinc carboxypeptidase A 1-like

      UniProtKB/TrEMBL
      F4W3S2
      Related
      XP_011068479.1, XM_011070177.1
      Conserved Domains (2) summary
      cd03860
      Location:64 → 268
      M14_CP_A-B_like; Peptidase M14 carboxypeptidase subfamily A/B-like
      pfam02244
      Location:1 → 49
      Propep_M14; Carboxypeptidase activation peptide
    Nucleotide Protein
    Heading Accession and Version

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