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    LOC105127231 transcription factor JUNGBRUNNEN 1-like [ Populus euphratica (Euphrates poplar) ]

    Gene ID: 105127231, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC105127231
    Gene description
    transcription factor JUNGBRUNNEN 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus euphratica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC105127231 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current PopEup_1.0 (GCF_000495115.1) Unplaced Scaffold NW_011499871.1 (399996..401578)

    NW_011499871.1Genomic Context describing neighboring genes Neighboring gene protein SRG1 Neighboring gene mavicyanin Neighboring gene uncharacterized LOC105127407 Neighboring gene putative phospholipid-transporting ATPase 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011499871.1 Unplaced Scaffold Reference PopEup_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor JUNGBRUNNEN 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus euphratica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PopEup_1.0 Primary Assembly

    Genomic

    1. NW_011499871.1 Reference PopEup_1.0 Primary Assembly

      Range
      399996..401578
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011028445.1 → XP_011026747.1  transcription factor JUNGBRUNNEN 1-like isoform X1

      UniProtKB/TrEMBL
      A0AAJ6UCL5
      Conserved Domains (1) summary
      pfam02365
      Location:23 → 64
      NAM; No apical meristem (NAM) protein

    2. XM_011028446.1 → XP_011026748.1  transcription factor JUNGBRUNNEN 1-like isoform X2

      UniProtKB/TrEMBL
      A0AAJ6UBC6
      Conserved Domains (1) summary
      pfam02365
      Location:23 → 64
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version

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