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    LOC105108340 ABSCISIC ACID-INSENSITIVE 5-like protein 1 [ Populus euphratica (Euphrates poplar) ]

    Gene ID: 105108340, updated on 1-Aug-2024

    Summary

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    Gene symbol
    LOC105108340
    Gene description
    ABSCISIC ACID-INSENSITIVE 5-like protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Populus euphratica
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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    Genomic context

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    See LOC105108340 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current PopEup_1.0 (GCF_000495115.1) Unplaced Scaffold NW_011500068.1 (356124..359478)

    NW_011500068.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105108337 Neighboring gene uncharacterized LOC105108338 Neighboring gene uncharacterized LOC105108341 Neighboring gene transcription factor TGA2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011500068.1 Unplaced Scaffold Reference PopEup_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ABSCISIC ACID-INSENSITIVE 5-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Populus euphratica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference PopEup_1.0 Primary Assembly

    Genomic

    1. NW_011500068.1 Reference PopEup_1.0 Primary Assembly

      Range
      356124..359478
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_011002614.1 → XP_011000916.1  ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011000916.1

      UniProtKB/TrEMBL
      A0AAJ6SYA9
      Conserved Domains (1) summary
      cd14707
      Location:268 → 315
      bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

    2. XM_011002613.1 → XP_011000915.1  ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X1

      See identical proteins and their annotated locations for XP_011000915.1

      UniProtKB/TrEMBL
      A0AAJ6SYA9
      Conserved Domains (1) summary
      cd14707
      Location:268 → 315
      bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain

    3. XM_011002615.1 → XP_011000917.1  ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2

      UniProtKB/TrEMBL
      A0AAJ6X075
      Conserved Domains (1) summary
      cd14707
      Location:268 → 293
      bZIP_plant_BZIP46; Basic leucine zipper (bZIP) domain of uncharaterized Plant BZIP transcription factors: a DNA-binding and dimerization domain
    Nucleotide Protein
    Heading Accession and Version

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