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    LOC105032402 GTP cyclohydrolase 1 [ Elaeis guineensis (African oil palm) ]

    Gene ID: 105032402, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC105032402
    Gene description
    GTP cyclohydrolase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Elaeis guineensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
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    Genomic context

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    See LOC105032402 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current EG5 (GCF_000442705.1) Unplaced Scaffold NW_011550954.1 (495990..507826, complement)

    NW_011550954.1Genomic Context describing neighboring genes Neighboring gene glycine-rich RNA-binding protein 2, mitochondrial Neighboring gene UDP-glucuronate 4-epimerase 6 Neighboring gene probable acyl-activating enzyme 16, chloroplastic Neighboring gene probable DNA replication complex GINS protein PSF3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_011550954 Unplaced Scaffold Reference EG5 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTP cyclohydrolase I activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tetrahydrobiopterin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tetrahydrofolate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GTP cyclohydrolase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Elaeis guineensis Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EG5 Primary Assembly

    Genomic

    1. NW_011550954.1 Reference EG5 Primary Assembly

      Range
      495990..507826 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010906847.3 → XP_010905149.1  GTP cyclohydrolase 1

      UniProtKB/TrEMBL
      A0A6I9Q8U4
      Conserved Domains (2) summary
      PLN02531
      Location:1 → 495
      PLN02531; GTP cyclohydrolase I
      cl00263
      Location:43 → 195
      TFold; Tunnelling fold (T-fold). The five known T-folds are found in five different enzymes with different functions: dihydroneopterin-triphosphate epimerase (DHNTPE), dihydroneopterin aldolase (DHNA) , GTP cyclohydrolase I (GTPCH-1), 6-pyrovoyl ...
    Nucleotide Protein
    Heading Accession and Version

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