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    LOC104777747 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [ Camelina sativa (false flax) ]

    Gene ID: 104777747, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC104777747
    Gene description
    1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelina sativa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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    Genomic context

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    See LOC104777747 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    101 current Cs (GCF_000633955.1) 3 NC_025687.1 (22640578..22641438, complement)

    Chromosome 3 - NC_025687.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104777745 Neighboring gene SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 Neighboring gene uncharacterized LOC104777748 Neighboring gene 50S ribosomal protein L18, chloroplastic

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_025687.1 Chromosome 3 Reference Cs

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phylloquinone biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in peroxisome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cs

    Genomic

    1. NC_025687.1 Reference Cs

      Range
      22640578..22641438 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010502053.2 → XP_010500355.1  1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1

      Conserved Domains (1) summary
      PLN02322
      Location:3 → 156
      PLN02322; acyl-CoA thioesterase
    Nucleotide Protein
    Heading Accession and Version

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