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    LOC104731320 5'-adenylylsulfate reductase 3, chloroplastic [ Camelina sativa (false flax) ]

    Gene ID: 104731320, updated on 9-Nov-2023

    Summary

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    Gene symbol
    LOC104731320
    Gene description
    5'-adenylylsulfate reductase 3, chloroplastic
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelina sativa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina
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    Genomic context

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    See LOC104731320 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    101 current Cs (GCF_000633955.1) 12 NC_025696.1 (11517978..11519960)

    Chromosome 12 - NC_025696.1Genomic Context describing neighboring genes Neighboring gene L-ascorbate oxidase homolog Neighboring gene uncharacterized LOC104731319 Neighboring gene autophagy-related protein 8a Neighboring gene uncharacterized LOC104733411

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_025696.1 Chromosome 12 Reference Cs

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. De novo assembly and characterization of Camelina sativa transcriptome by paired-end sequencing. Liang C, et al. BMC Genomics, 2013 Mar 5. PMID 23496985, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphoadenylyl-sulfate reductase (thioredoxin) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    5'-adenylylsulfate reductase 3, chloroplastic

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Camelina sativa Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Cs

    Genomic

    1. NC_025696.1 Reference Cs

      Range
      11517978..11519960
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010450653.2 → XP_010448955.1  5'-adenylylsulfate reductase 3, chloroplastic

      Conserved Domains (3) summary
      PLN02309
      Location:21 → 456
      PLN02309; 5'-adenylylsulfate reductase
      PRK02090
      Location:81 → 320
      PRK02090; phosphoadenosine phosphosulfate reductase; Provisional
      cd02993
      Location:344 → 452
      PDI_a_APS_reductase; PDIa family, 5'-Adenylylsulfate (APS) reductase subfamily; composed of plant-type APS reductases containing a C-terminal redox active TRX domain and an N-terminal reductase domain which is part of a superfamily that includes N type ATP PPases. APS ...
    Nucleotide Protein
    Heading Accession and Version

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