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    LOC104603776 WUSCHEL-related homeobox 8 [ Nelumbo nucifera (sacred lotus) ]

    Gene ID: 104603776, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC104603776
    Gene description
    WUSCHEL-related homeobox 8
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Nelumbo nucifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Proteales; Nelumbonaceae; Nelumbo
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    Genomic context

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    See LOC104603776 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current Chinese Lotus 1.1 (GCF_000365185.1) Unplaced Scaffold NW_010729117.1 (2918912..2924090)

    NW_010729117.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104603775 Neighboring gene metallothionein-like protein 4B Neighboring gene putative pentatricopeptide repeat-containing protein At5g43820 Neighboring gene protein EXORDIUM-like 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_010729117.1 Unplaced Scaffold Reference Chinese Lotus 1.1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WUSCHEL-related homeobox 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Nelumbo nucifera Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Chinese Lotus 1.1 Primary Assembly

    Genomic

    1. NW_010729117.1 Reference Chinese Lotus 1.1 Primary Assembly

      Range
      2918912..2924090
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010267902.2 → XP_010266204.1  WUSCHEL-related homeobox 8 isoform X1

      See identical proteins and their annotated locations for XP_010266204.1

      UniProtKB/TrEMBL
      A0A1U8AGH0
      Conserved Domains (1) summary
      pfam00046
      Location:104 → 162
      Homeobox; Homeobox domain

    2. XM_010267903.2 → XP_010266205.1  WUSCHEL-related homeobox 8 isoform X1

      See identical proteins and their annotated locations for XP_010266205.1

      UniProtKB/TrEMBL
      A0A1U8AGH0
      Conserved Domains (1) summary
      pfam00046
      Location:104 → 162
      Homeobox; Homeobox domain

    3. XM_010267905.2 → XP_010266207.1  WUSCHEL-related homeobox 8 isoform X2

      UniProtKB/TrEMBL
      A0A1U8AJS9
      Conserved Domains (1) summary
      pfam00046
      Location:104 → 161
      Homeobox; Homeobox domain

    RNA

    1. XR_736264.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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