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    PPP1R42 protein phosphatase 1 regulatory subunit 42 [ Apaloderma vittatum (bar-tailed trogon) ]

    Gene ID: 104277355, updated on 3-Aug-2024

    Summary

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    Gene symbol
    PPP1R42
    Gene description
    protein phosphatase 1 regulatory subunit 42
    Locus tag
    N311_04514
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apaloderma vittatum
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Apaloderma
    Orthologs
    human mouse all
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    Genomic context

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    See PPP1R42 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    100 current ASM70340v1 (GCF_000703405.1) Unplaced Scaffold NW_009728108.1 (12672..26043, complement)

    NW_009728108.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009728108.1 Unplaced Scaffold Reference ASM70340v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 42

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Apaloderma vittatum Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM70340v1

    Genomic

    1. NW_009728108.1 Reference ASM70340v1

      Range
      12672..26043 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009873966.1 → XP_009872268.1  protein phosphatase 1 regulatory subunit 42

      UniProtKB/TrEMBL
      A0A091NP15
      Conserved Domains (3) summary
      cd00116
      Location:31 → 227
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:31 → 51
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:29 → 82
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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