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    ARIH2 ariadne RBR E3 ubiquitin protein ligase 2 [ Cariama cristata (Red-legged seriema) ]

    Gene ID: 104169651, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ARIH2
    Gene description
    ariadne RBR E3 ubiquitin protein ligase 2
    Locus tag
    N322_11056
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cariama cristata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Cariamiformes; Cariamidae; Cariama
    Orthologs
    human mouse all
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    Genomic context

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    See ARIH2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current ASM69053v1 (GCF_000690535.1) Unplaced Scaffold NW_009601942.1 (3931..32447)

    NW_009601942.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009601942.1 Unplaced Scaffold Reference ASM69053v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin conjugating enzyme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase ARIH2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cariama cristata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69053v1

    Genomic

    1. NW_009601942.1 Reference ASM69053v1

      Range
      3931..32447
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009710628.1 → XP_009708930.1  E3 ubiquitin-protein ligase ARIH2

      See identical proteins and their annotated locations for XP_009708930.1

      UniProtKB/TrEMBL
      A0A091LV81
      Conserved Domains (2) summary
      smart00647
      Location:205 → 267
      IBR; In Between Ring fingers
      pfam01485
      Location:295 → 327
      IBR; IBR domain, a half RING-finger domain
    Nucleotide Protein
    Heading Accession and Version

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