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    PPP1R42 protein phosphatase 1 regulatory subunit 42 [ Cariama cristata (Red-legged seriema) ]

    Gene ID: 104156499, updated on 3-Aug-2024

    Summary

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    Gene symbol
    PPP1R42
    Gene description
    protein phosphatase 1 regulatory subunit 42
    Locus tag
    N322_11211
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cariama cristata
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Cariamiformes; Cariamidae; Cariama
    Orthologs
    human mouse all
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    Genomic context

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    See PPP1R42 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    100 current ASM69053v1 (GCF_000690535.1) Unplaced Scaffold NW_009624779.1 (3360..26593, complement)

    NW_009624779.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_009624779.1 Unplaced Scaffold Reference ASM69053v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein phosphatase 1 regulatory subunit 42

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cariama cristata Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69053v1

    Genomic

    1. NW_009624779.1 Reference ASM69053v1

      Range
      3360..26593 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009703294.1 → XP_009701596.1  protein phosphatase 1 regulatory subunit 42

      Conserved Domains (3) summary
      COG4886
      Location:33 → 208
      LRR; Leucine-rich repeat (LRR) protein [Transcription]
      cd00116
      Location:19 → 206
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:31 → 51
      LRR_RI; leucine-rich repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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