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    ARCVE_RS09435 radical SAM protein [ Archaeoglobus veneficus SNP6 ]

    Gene ID: 10395027, updated on 22-Oct-2024

    Summary

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    Gene symbol
    ARCVE_RS09435
    Gene description
    radical SAM protein
    Locus tag
    ARCVE_RS09435
    Gene type
    protein coding
    Organism
    Archaeoglobus veneficus SNP6 (strain: SNP6, type-material: type strain of Archaeoglobus veneficus)
    Lineage
    Archaea; Methanobacteriati; Methanobacteriota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus
    Old locus tag
    Arcve_1896
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    Genomic context

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    Sequence:
    NC_015320.1 (1691037..1691876)

    NC_015320.1Genomic Context describing neighboring genes Neighboring gene phosphopantetheine adenylyltransferase Neighboring gene inosine/xanthosine triphosphatase Neighboring gene M48 family metallopeptidase Neighboring gene type I restriction endonuclease subunit R Neighboring gene PIN domain-containing protein Neighboring gene AbrB/MazE/SpoVT family DNA-binding domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_015320.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Anaerobic sulfatase-maturating enzymes: radical SAM enzymes able to catalyze in vitro sulfatase post-translational modification. Benjdia A, et al. J Am Chem Soc, 2007 Mar 28. PMID 17335281
    2. A new type of bacterial sulfatase reveals a novel maturation pathway in prokaryotes. Berteau O, et al. J Biol Chem, 2006 Aug 11. PMID 16766528
    3. Radical SAM, a novel protein superfamily linking unresolved steps in familiar biosynthetic pathways with radical mechanisms: functional characterization using new analysis and information visualization methods. Sofia HJ, et al. Nucleic Acids Res, 2001 Mar 1. PMID 11222759, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    radical SAM protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_015320.1 Reference assembly

      Range
      1691037..1691876
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_013684545.1 radical SAM protein [Archaeoglobus veneficus]

      See identical proteins and their annotated locations for WP_013684545.1

      UniProtKB/TrEMBL
      F2KRF5
      Conserved Domains (3) summary
      cd01335
      Location:24 → 175
      Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
      COG1533
      Location:6 → 279
      SplB; DNA repair photolyase [Replication, recombination and repair]
      pfam08902
      Location:118 → 268
      DUF1848; Domain of unknown function (DUF1848)
    Nucleotide Protein
    Heading Accession and Version

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