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    MBL mannose-binding lectin [ Pygoscelis adeliae (Adelie penguin) ]

    Gene ID: 103924215, updated on 3-Aug-2024

    Summary

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    Gene symbol
    MBL
    Gene description
    mannose-binding lectin
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pygoscelis adeliae
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae; Pygoscelis
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    Genomic context

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    See MBL in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    100 current ASM69910v1 (GCF_000699105.1) Unplaced Scaffold NW_008825610.1 (1350539..1354862, complement)

    NW_008825610.1Genomic Context describing neighboring genes Neighboring gene pulmonary surfactant-associated protein A-like Neighboring gene Pulmonary surfactant-associated protein A Neighboring gene RasGEF domain family member 1A Neighboring gene chondroitin sulfate N-acetylgalactosaminyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008825610.1 Unplaced Scaffold Reference ASM69910v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in positive regulation of phagocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in surfactant homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in multivesicular body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in rough endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: pulmonary surfactant-associated protein D

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pygoscelis adeliae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69910v1 Primary Assembly

    Genomic

    1. NW_008825610.1 Reference ASM69910v1 Primary Assembly

      Range
      1350539..1354862 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009332702.1 → XP_009330977.1  LOW QUALITY PROTEIN: pulmonary surfactant-associated protein D

      Conserved Domains (3) summary
      pfam01391
      Location:47 → 100
      Collagen; Collagen triple helix repeat (20 copies)
      pfam09006
      Location:105 → 143
      Surfac_D-trimer; Lung surfactant protein D coiled-coil trimerization
      cl02432
      Location:142 → 254
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    Nucleotide Protein
    Heading Accession and Version

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