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    LOC103873172 anaphase-promoting complex subunit 8 [ Brassica rapa (field mustard) ]

    Gene ID: 103873172, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103873172
    Gene description
    anaphase-promoting complex subunit 8
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    Location:
    chromosome: A6
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A06 NC_024800.2 (10657284..10660081)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A6 NC_024800.1 (10111492..10114281)

    Chromosome A06 - NC_024800.2Genomic Context describing neighboring genes Neighboring gene zinc finger BED domain-containing protein RICESLEEPER 1-like Neighboring gene uncharacterized LOC117126241 Neighboring gene E2F transcription factor-like E2FE Neighboring gene uncharacterized LOC103873171 Neighboring gene two-component response regulator ARR5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of anaphase-promoting complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    anaphase-promoting complex subunit 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024800.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      10657284..10660081
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009151596.3 → XP_009149844.1  anaphase-promoting complex subunit 8 isoform X1

      UniProtKB/TrEMBL
      A0A397Z2M2, A0A3P5YTI4, M4DNJ4
      Conserved Domains (3) summary
      COG0457
      Location:258 → 502
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:339 → 367
      TPR; TPR repeat [structural motif]
      pfam04049
      Location:7 → 159
      ANAPC8; Anaphase promoting complex subunit 8 / Cdc23

    2. XM_033274002.1 → XP_033129893.1  anaphase-promoting complex subunit 8 isoform X2

      UniProtKB/TrEMBL
      A0A397Z2M2
      Conserved Domains (3) summary
      COG0457
      Location:246 → 490
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:327 → 355
      TPR; TPR repeat [structural motif]
      pfam04049
      Location:18 → 147
      ANAPC8; Anaphase promoting complex subunit 8 / Cdc23
    Nucleotide Protein
    Heading Accession and Version

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