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    LOC103858293 LOB domain-containing protein 11 [ Brassica rapa (field mustard) ]

    Gene ID: 103858293, updated on 31-May-2023

    Summary

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    Gene symbol
    LOC103858293
    Gene description
    LOB domain-containing protein 11
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103858293 in Genome Data Viewer
    Location:
    chromosome: A3
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A03 NC_024797.2 (12241445..12246764)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A3 NC_024797.1 (11387129..11388814)

    Chromosome A03 - NC_024797.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103858291 Neighboring gene V-type proton ATPase subunit a1 Neighboring gene uncharacterized CRM domain-containing protein At3g25440, chloroplastic Neighboring gene beta-galactosidase 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-Wide Identification and Characterization of BrrTCP Transcription Factors in Brassica rapa ssp. rapa. Du J, et al. Front Plant Sci, 2017. PMID 28955373, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOB domain-containing protein 11
    Names
    transcription factor LBD11a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024797.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      12241445..12246764
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009135627.3 → XP_009133875.1  LOB domain-containing protein 11

      See identical proteins and their annotated locations for XP_009133875.1

      UniProtKB/TrEMBL
      A0A291LQZ3, A0A397ZY00, M4C8G3
      Conserved Domains (1) summary
      pfam03195
      Location:54 → 151
      LOB; Lateral organ boundaries (LOB) domain
    Nucleotide Protein
    Heading Accession and Version

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