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    LOC103844913 calcium/calmodulin-regulated receptor-like kinase 1 [ Brassica rapa (field mustard) ]

    Gene ID: 103844913, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103844913
    Gene description
    calcium/calmodulin-regulated receptor-like kinase 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103844913 in Genome Data Viewer
    Location:
    chromosome: A10
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A10 NC_024804.2 (10438010..10441025)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A10 NC_024804.1 (6344982..6347994)

    Chromosome A10 - NC_024804.2Genomic Context describing neighboring genes Neighboring gene organelle RRM domain-containing protein 2, mitochondrial Neighboring gene uncharacterized LOC103844912 Neighboring gene 50S ribosomal protein L24, chloroplastic Neighboring gene ankyrin repeat-containing protein BDA1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    calcium/calmodulin-regulated receptor-like kinase 1
    Names
    probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024804.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      10438010..10441025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009121738.3 → XP_009119986.1  calcium/calmodulin-regulated receptor-like kinase 1

      See identical proteins and their annotated locations for XP_009119986.1

      UniProtKB/TrEMBL
      A0A397XSE9, M4CFJ2
      Conserved Domains (2) summary
      smart00221
      Location:116 → 377
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:120 → 377
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    2. XM_009121737.3 → XP_009119985.1  calcium/calmodulin-regulated receptor-like kinase 1

      See identical proteins and their annotated locations for XP_009119985.1

      UniProtKB/TrEMBL
      A0A397XSE9, M4CFJ2
      Conserved Domains (2) summary
      smart00221
      Location:116 → 377
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:120 → 377
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs

    3. XM_009121739.3 → XP_009119987.1  calcium/calmodulin-regulated receptor-like kinase 1

      See identical proteins and their annotated locations for XP_009119987.1

      UniProtKB/TrEMBL
      A0A397XSE9, M4CFJ2
      Conserved Domains (2) summary
      smart00221
      Location:116 → 377
      STYKc; Protein kinase; unclassified specificity
      cd14066
      Location:120 → 377
      STKc_IRAK; Catalytic domain of the Serine/Threonine kinases, Interleukin-1 Receptor Associated Kinases and related STKs
    Nucleotide Protein
    Heading Accession and Version

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