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    LOC103835326 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [ Brassica rapa (field mustard) ]

    Gene ID: 103835326, updated on 7-Dec-2023

    Summary

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    Gene symbol
    LOC103835326
    Gene description
    protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Brassica rapa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica
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    Genomic context

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    See LOC103835326 in Genome Data Viewer
    Location:
    chromosome: A8
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    103.20201202 current CAAS_Brap_v3.01 (GCF_000309985.2) A08 NC_024802.2 (17770523..17771936)
    101 previous assembly Brapa_1.0 (GCF_000309985.1) A8 NC_024802.1 (16918948..16920340)

    Chromosome A08 - NC_024802.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117127423 Neighboring gene protein E6 Neighboring gene serine/threonine-protein kinase-like protein At1g28390 Neighboring gene MACPF domain-containing protein NSL1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Brassica rapa Updated Annotation Release 103.20201202

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CAAS_Brap_v3.01 Primary Assembly

    Genomic

    1. NC_024802.2 Reference CAAS_Brap_v3.01 Primary Assembly

      Range
      17770523..17771936
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009111481.3 → XP_009109729.1  protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A397YHG5, A0A8D9HGR1

    2. XM_009111479.2 → XP_009109727.1  protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A397YDA5, A0A8D9HGR1

    3. XM_009111480.3 → XP_009109728.1  protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X2

      See identical proteins and their annotated locations for XP_009109728.1

      UniProtKB/TrEMBL
      A0A397YCW7, A0A8D9HGR1, M4D324

    4. XM_018653627.2 → XP_018509143.1  protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A397YDA5, A0A8D9HGR1

    RNA

    1. XR_626652.3 RNA Sequence

    2. XR_004450070.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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