U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC103639539 O-fucosyltransferase family protein [ Zea mays ]

    Gene ID: 103639539, updated on 14-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC103639539
    Gene description
    O-fucosyltransferase family protein
    Locus tag
    ZEAMMB73_Zm00001d048323
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zea mays
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea
    Also known as
    GRMZM2G178945
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 9
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Zm-B73-REFERENCE-NAM-5.0 (GCF_902167145.1) 9 NC_050104.1 (157756936..157760915)
    102.20200423 previous assembly B73 RefGen_v4 (GCF_000005005.2) 9 NC_024467.2 (154485280..154489205)

    Chromosome 9 - NC_050104.1Genomic Context describing neighboring genes Neighboring gene conserved oligomeric Golgi complex subunit 4-like Neighboring gene 50S ribosomal protein L18 Neighboring gene pectinesterase 31 Neighboring gene ribulose-phosphate 3-epimerase Neighboring gene uncharacterized LOC100282208

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Insights into corn genes derived from large-scale cDNA sequencing. Alexandrov NN, et al. Plant Mol Biol, 2009 Jan. PMID 18937034, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in chloroplast IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Rhamnogalacturonan I rhamnosyltransferase 1; uncharacterized protein

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001330532.1 → NP_001317461.1  Rhamnogalacturonan I rhamnosyltransferase 1

      Status: PROVISIONAL

      Source sequence(s)
      CABHLF010000005, EE043448, EU956187
      UniProtKB/TrEMBL
      A0A317YK61, A0A3L6DGY0, A0A804RCK8
      Conserved Domains (1) summary
      cd11299
      Location:62 → 360
      O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily

    RefSeqs of Annotated Genomes: Zea mays Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

    Genomic

    1. NC_050104.1 Reference Zm-B73-REFERENCE-NAM-5.0 Primary Assembly

      Range
      157756936..157760915
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008662281.4 → XP_008660503.1  uncharacterized protein isoform X1

      See identical proteins and their annotated locations for XP_008660503.1

      UniProtKB/TrEMBL
      A0A317YK61, A0A3L6DGU9, K7W2X3
      Conserved Domains (1) summary
      cd11299
      Location:62 → 387
      O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily

    2. XM_023301001.2 → XP_023156769.1  uncharacterized protein isoform X2

      UniProtKB/TrEMBL
      A0A804R786, A0A804REC3
      Conserved Domains (1) summary
      cd11299
      Location:62 → 328
      O-FucT_plant; GDP-fucose protein O-fucosyltransferase, plant specific subfamily
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials