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    LOC103625595 complement C1q tumor necrosis factor-related protein 7 [ Corvus brachyrhynchos (American crow) ]

    Gene ID: 103625595, updated on 3-Aug-2024

    Summary

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    Gene symbol
    LOC103625595
    Gene description
    complement C1q tumor necrosis factor-related protein 7
    Locus tag
    N302_15050
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Corvus brachyrhynchos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
    Also known as
    CC2D2A; C1QTNF7
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    Genomic context

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    See LOC103625595 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    40
    Annotation release Status Assembly Chr Location
    101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008236769.1 (5056122..5156764, complement)

    NW_008236769.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 Neighboring gene F-box and leucine rich repeat protein 5 Neighboring gene uncharacterized LOC108445047 Neighboring gene cytoplasmic polyadenylation element binding protein 2 Neighboring gene uncharacterized LOC108445048

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_008236769.1 Unplaced Scaffold Reference ASM69197v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in non-motile cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to ciliary transition zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ciliary transition zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coiled-coil and C2 domain-containing protein 2A; complement C1q tumor necrosis factor-related protein 7
    Names
    C1q and tumor necrosis factor related protein 7
    Coiled-coil and C2 domain-containing protein 2A
    coiled-coil and C2 domain containing 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM69197v1

    Genomic

    1. NW_008236769.1 Reference ASM69197v1

      Range
      5056122..5156764 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017727601.1 → XP_017583090.1  coiled-coil and C2 domain-containing protein 2A isoform X1

      UniProtKB/TrEMBL
      A0A091EDK3

    2. XM_017727606.1 → XP_017583095.1  coiled-coil and C2 domain-containing protein 2A isoform X5

      UniProtKB/TrEMBL
      A0A091EDK3

    3. XM_017727605.1 → XP_017583094.1  coiled-coil and C2 domain-containing protein 2A isoform X5

      UniProtKB/TrEMBL
      A0A091EDK3

    4. XM_017727602.1 → XP_017583091.1  coiled-coil and C2 domain-containing protein 2A isoform X2

      UniProtKB/TrEMBL
      A0A091EDK3

    5. XM_017727603.1 → XP_017583092.1  coiled-coil and C2 domain-containing protein 2A isoform X3

      UniProtKB/TrEMBL
      A0A091EDK3

    6. XM_017727604.1 → XP_017583093.1  coiled-coil and C2 domain-containing protein 2A isoform X4

      UniProtKB/TrEMBL
      A0A091EDK3

    7. XM_008645044.2 → XP_008643266.1  complement C1q tumor necrosis factor-related protein 7 isoform X6

      See identical proteins and their annotated locations for XP_008643266.1

      UniProtKB/TrEMBL
      A0A091EEW9
      Conserved Domains (2) summary
      pfam01391
      Location:68 → 137
      Collagen; Collagen triple helix repeat (20 copies)
      pfam00386
      Location:149 → 273
      C1q; C1q domain
    Nucleotide Protein
    Heading Accession and Version

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