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    SPIN1 spindlin 1 [ Galeopterus variegatus (Sunda flying lemur) ]

    Gene ID: 103605054, updated on 11-Mar-2024

    Summary

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    Gene symbol
    SPIN1
    Gene description
    spindlin 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Galeopterus variegatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Galeopterus
    Orthologs
    human mouse all
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    Genomic context

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    See SPIN1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    100 current G_variegatus-3.0.2 (GCF_000696425.1) Unplaced Scaffold NW_007731673.1 (74741..148964, complement)

    NW_007731673.1Genomic Context describing neighboring genes Neighboring gene nucleoredoxin like 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_007731673 unplaced scaffold reference G_variegatus-3.0.2 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables methylated histone binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in gamete generation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    spindlin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Galeopterus variegatus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference G_variegatus-3.0.2 Primary Assembly

    Genomic

    1. NW_007731673.1 Reference G_variegatus-3.0.2 Primary Assembly

      Range
      74741..148964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008589640.1 → XP_008587862.1  spindlin-1 isoform X2

      Conserved Domains (1) summary
      pfam02513
      Location:54 → 102
      Spin-Ssty; Spin/Ssty Family

    2. XM_008589639.1 → XP_008587861.1  spindlin-1 isoform X1

      See identical proteins and their annotated locations for XP_008587861.1

      Conserved Domains (1) summary
      pfam02513
      Location:87 → 135
      Spin-Ssty; Spin/Ssty Family

    3. XM_008589636.1 → XP_008587858.1  spindlin-1 isoform X1

      See identical proteins and their annotated locations for XP_008587858.1

      Conserved Domains (1) summary
      pfam02513
      Location:87 → 135
      Spin-Ssty; Spin/Ssty Family

    4. XM_008589638.1 → XP_008587860.1  spindlin-1 isoform X1

      See identical proteins and their annotated locations for XP_008587860.1

      Conserved Domains (1) summary
      pfam02513
      Location:87 → 135
      Spin-Ssty; Spin/Ssty Family

    5. XM_008589637.1 → XP_008587859.1  spindlin-1 isoform X1

      See identical proteins and their annotated locations for XP_008587859.1

      Conserved Domains (1) summary
      pfam02513
      Location:87 → 135
      Spin-Ssty; Spin/Ssty Family
    Nucleotide Protein
    Heading Accession and Version

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