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    LOC103503846 ER membrane protein complex subunit 7 homolog [ Cucumis melo (muskmelon) ]

    Gene ID: 103503846, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103503846
    Gene description
    ER membrane protein complex subunit 7 homolog
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103503846 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 4 NC_066860.1 (3543441..3547028)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007547663.1 (3525943..3529569)

    Chromosome 4 - NC_066860.1Genomic Context describing neighboring genes Neighboring gene synaptotagmin-4-like Neighboring gene uncharacterized vacuolar membrane protein YML018C Neighboring gene cysteine--tRNA ligase, chloroplastic/mitochondrial Neighboring gene uncharacterized LOC103503848

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of EMC complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ER membrane protein complex subunit 7 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066860.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      3543441..3547028
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008468216.3 → XP_008466438.1  ER membrane protein complex subunit 7 homolog

      UniProtKB/TrEMBL
      A0A1S3CRF1, A0A5A7VA68, A0A5D3E7A7
      Conserved Domains (1) summary
      cl21470
      Location:56 → 157
      Peptidase_M14NE-CP-C_like; Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain
    Nucleotide Protein
    Heading Accession and Version

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