U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC103498309 O-fucosyltransferase 23 [ Cucumis melo (muskmelon) ]

    Gene ID: 103498309, updated on 10-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC103498309
    Gene description
    O-fucosyltransferase 23
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC103498309 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 12 NC_066868.1 (19661707..19664355)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546316.1 (2527036..2529223)

    Chromosome 12 - NC_066868.1Genomic Context describing neighboring genes Neighboring gene ras-related protein RABF2b Neighboring gene snRNA-activating protein complex subunit Neighboring gene E3 ubiquitin-protein ligase RSL1 Neighboring gene uncharacterized LOC103498312

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in pollen-pistil interaction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    O-fucosyltransferase 23

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066868.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      19661707..19664355
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051080636.1 → XP_050936593.1  O-fucosyltransferase 23

      UniProtKB/TrEMBL
      A0A1S4E296, A0A5A7TPH5

    2. XM_008460877.3 → XP_008459099.1  O-fucosyltransferase 23

      See identical proteins and their annotated locations for XP_008459099.1

      UniProtKB/TrEMBL
      A0A1S4E296, A0A5A7TPH5, A0A9I9DQ73
      Conserved Domains (1) summary
      pfam10250
      Location:83 → 384
      O-FucT; GDP-fucose protein O-fucosyltransferase

    3. XM_051080637.1 → XP_050936594.1  O-fucosyltransferase 23

      UniProtKB/TrEMBL
      A0A1S4E296, A0A5A7TPH5
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases