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    LOC103494561 60S ribosomal protein L18-3 [ Cucumis melo (muskmelon) ]

    Gene ID: 103494561, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC103494561
    Gene description
    60S ribosomal protein L18-3
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103494561 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 5 NC_066861.1 (26402677..26405033, complement)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546270.1 (4988620..4990980, complement)

    Chromosome 5 - NC_066861.1Genomic Context describing neighboring genes Neighboring gene F-box protein PP2-B13-like Neighboring gene chlorophyll a-b binding protein 6A, chloroplastic Neighboring gene small nucleolar RNA snoR53Y Neighboring gene small nucleolar RNA snoR69Y Neighboring gene small nucleolar RNA snoR69Y Neighboring gene small nucleolar RNA snoR69Y Neighboring gene F-actin-capping protein subunit alpha Neighboring gene uncharacterized LOC103494580

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    60S ribosomal protein L18-3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066861.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      26402677..26405033 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008455793.2 → XP_008454015.1  60S ribosomal protein L18-3

      UniProtKB/TrEMBL
      A0A1S3BYV3, A0A5A7U3L4
      Conserved Domains (1) summary
      pfam17135
      Location:2 → 187
      Ribosomal_L18; Ribosomal protein 60S L18 and 50S L18e
    Nucleotide Protein
    Heading Accession and Version

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