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    LOC103486233 serine/threonine-protein kinase STY13 [ Cucumis melo (muskmelon) ]

    Gene ID: 103486233, updated on 10-Oct-2024

    Summary

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    Gene symbol
    LOC103486233
    Gene description
    serine/threonine-protein kinase STY13
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cucumis melo
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Benincaseae; Cucumis
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    Genomic context

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    See LOC103486233 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current USDA_Cmelo_AY_1.0 (GCF_025177605.1) 4 NC_066860.1 (34751108..34755312)
    101 previous assembly ASM31304v1 (GCF_000313045.1) Unplaced Scaffold NW_007546278.1 (156164..160432, complement)

    Chromosome 4 - NC_066860.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103486235 Neighboring gene protein DETOXIFICATION 53 Neighboring gene pentatricopeptide repeat-containing protein At5g15300-like Neighboring gene non-specific lipid-transfer protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein kinase STY13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cucumis melo Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference USDA_Cmelo_AY_1.0 Primary Assembly

    Genomic

    1. NC_066860.1 Reference USDA_Cmelo_AY_1.0 Primary Assembly

      Range
      34751108..34755312
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008444105.3 → XP_008442327.1  serine/threonine-protein kinase STY13 isoform X2

      UniProtKB/TrEMBL
      A0A1S3B636, A0A5A7TLL1, A0A5D3DMQ1
      Conserved Domains (1) summary
      cd13999
      Location:58 → 313
      STKc_MAP3K-like; Catalytic domain of Mitogen-Activated Protein Kinase (MAPK) Kinase Kinase-like Serine/Threonine kinases

    2. XM_051084287.1 → XP_050940244.1  serine/threonine-protein kinase STY13 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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